#!/usr/bin/env python
import sys

if len(sys.argv) != 3:
    print >> sys.stderr, "Usage: src2tsv infile outfile\n"
    sys.exit(1)

from ciao_contrib.runtool import dmcopy
dmcopy.infile = sys.argv[1]
dmcopy.outfile = sys.argv[2]+'[opt kernel=text/tsv]'
dmcopy.clobber = True
dmcopy()

with open( sys.argv[2], "r" ) as fp:
    outfile = fp.readlines()

# first 1st line w/o comment character
idx = next( ii for ii in xrange( len(outfile) ) if outfile[ii][0] != "#" )

# replace vector and arrays with scalars
outfile[idx] = outfile[idx].replace( "POS(X,Y)", "X\tY")
outfile[idx] = outfile[idx].replace( "CELLPOS(CELL_X,CELL_Y)", "CELL_X\tCELL_Y")
outfile[idx] = outfile[idx].replace( "R[2]", "R1\tR2")

with open( sys.argv[2], "w" ) as fp:
    fp.writelines( outfile )

sys.exit(0)